Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.
Identifieur interne : 001511 ( Main/Exploration ); précédent : 001510; suivant : 001512Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.
Auteurs : Frank N. Martin [États-Unis] ; Z Gloria Abad [États-Unis] ; Yilmaz Balci [États-Unis] ; Kelly Ivors [États-Unis]Source :
- Plant disease [ 0191-2917 ] ; 2012.
Abstract
With the increased attention given to the genus Phytophthora in the last decade in response to the ecological and economic impact of several invasive species (such as P. ramorum, P. kernoviae, and P. alni), there has been a significant increase in the number of described species. In part, this is due to the extensive surveys in historically underexplored ecosystems (e.g., forest and stream ecosystems) undertaken to determine the spread of invasive species and the involvement of Phytophthora species in forest decline worldwide (e.g., oak decline). The past decade has seen an approximate doubling in the number of described species within the genus Phytophthora, and the number will likely continue to increase as more surveys are completed and greater attention is devoted to clarifying phylogenetic relationships and delineating boundaries in species complexes. The development of molecular resources, the availability of credible sequence databases to simplify identification of new species, and the sequencing of several genomes have provided a solid framework to gain a better understanding of the biology, diversity, and taxonomic relationships within the genus. This information is much needed considering the impact invasive or exotic Phytophthora species have had on natural ecosystems and the regulatory issues associated with their management. While this work is improving our ability to identify species based on phylogenetic grouping, it has also revealed that the genus has a much greater diversity than previously appreciated.
DOI: 10.1094/PDIS-12-11-1036-FE
PubMed: 30727075
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.</title><author><name sortKey="Martin, Frank N" sort="Martin, Frank N" uniqKey="Martin F" first="Frank N" last="Martin">Frank N. Martin</name><affiliation wicri:level="2"><nlm:affiliation>USDA, ARS, Crop Improvement and Protection Research Unit, Salinas, CA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>USDA, ARS, Crop Improvement and Protection Research Unit, Salinas</wicri:cityArea></affiliation></author><author><name sortKey="Abad, Z Gloria" sort="Abad, Z Gloria" uniqKey="Abad Z" first="Z Gloria" last="Abad">Z Gloria Abad</name><affiliation wicri:level="2"><nlm:affiliation>USDA, APHIS, PPQ, Center for Plant Health Science and Technology (CPHST), Beltsville Laboratory, MD.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Maryland</region></placeName><wicri:cityArea>USDA, APHIS, PPQ, Center for Plant Health Science and Technology (CPHST), Beltsville Laboratory</wicri:cityArea></affiliation></author><author><name sortKey="Balci, Yilmaz" sort="Balci, Yilmaz" uniqKey="Balci Y" first="Yilmaz" last="Balci">Yilmaz Balci</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Maryland</region></placeName><wicri:cityArea>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park</wicri:cityArea></affiliation></author><author><name sortKey="Ivors, Kelly" sort="Ivors, Kelly" uniqKey="Ivors K" first="Kelly" last="Ivors">Kelly Ivors</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology, NC State University, Mountain Hort. Crops Research & Extension Center, Mills River, NC.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Caroline du Nord</region></placeName><wicri:cityArea>Department of Plant Pathology, NC State University, Mountain Hort. Crops Research & Extension Center, Mills River</wicri:cityArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2012">2012</date><idno type="RBID">pubmed:30727075</idno><idno type="pmid">30727075</idno><idno type="doi">10.1094/PDIS-12-11-1036-FE</idno><idno type="wicri:Area/Main/Corpus">001465</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001465</idno><idno type="wicri:Area/Main/Curation">001465</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001465</idno><idno type="wicri:Area/Main/Exploration">001465</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.</title><author><name sortKey="Martin, Frank N" sort="Martin, Frank N" uniqKey="Martin F" first="Frank N" last="Martin">Frank N. Martin</name><affiliation wicri:level="2"><nlm:affiliation>USDA, ARS, Crop Improvement and Protection Research Unit, Salinas, CA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>USDA, ARS, Crop Improvement and Protection Research Unit, Salinas</wicri:cityArea></affiliation></author><author><name sortKey="Abad, Z Gloria" sort="Abad, Z Gloria" uniqKey="Abad Z" first="Z Gloria" last="Abad">Z Gloria Abad</name><affiliation wicri:level="2"><nlm:affiliation>USDA, APHIS, PPQ, Center for Plant Health Science and Technology (CPHST), Beltsville Laboratory, MD.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Maryland</region></placeName><wicri:cityArea>USDA, APHIS, PPQ, Center for Plant Health Science and Technology (CPHST), Beltsville Laboratory</wicri:cityArea></affiliation></author><author><name sortKey="Balci, Yilmaz" sort="Balci, Yilmaz" uniqKey="Balci Y" first="Yilmaz" last="Balci">Yilmaz Balci</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Maryland</region></placeName><wicri:cityArea>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park</wicri:cityArea></affiliation></author><author><name sortKey="Ivors, Kelly" sort="Ivors, Kelly" uniqKey="Ivors K" first="Kelly" last="Ivors">Kelly Ivors</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology, NC State University, Mountain Hort. Crops Research & Extension Center, Mills River, NC.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Caroline du Nord</region></placeName><wicri:cityArea>Department of Plant Pathology, NC State University, Mountain Hort. Crops Research & Extension Center, Mills River</wicri:cityArea></affiliation></author></analytic><series><title level="j">Plant disease</title><idno type="ISSN">0191-2917</idno><imprint><date when="2012" type="published">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">With the increased attention given to the genus Phytophthora in the last decade in response to the ecological and economic impact of several invasive species (such as P. ramorum, P. kernoviae, and P. alni), there has been a significant increase in the number of described species. In part, this is due to the extensive surveys in historically underexplored ecosystems (e.g., forest and stream ecosystems) undertaken to determine the spread of invasive species and the involvement of Phytophthora species in forest decline worldwide (e.g., oak decline). The past decade has seen an approximate doubling in the number of described species within the genus Phytophthora, and the number will likely continue to increase as more surveys are completed and greater attention is devoted to clarifying phylogenetic relationships and delineating boundaries in species complexes. The development of molecular resources, the availability of credible sequence databases to simplify identification of new species, and the sequencing of several genomes have provided a solid framework to gain a better understanding of the biology, diversity, and taxonomic relationships within the genus. This information is much needed considering the impact invasive or exotic Phytophthora species have had on natural ecosystems and the regulatory issues associated with their management. While this work is improving our ability to identify species based on phylogenetic grouping, it has also revealed that the genus has a much greater diversity than previously appreciated.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">30727075</PMID><DateRevised><Year>2019</Year><Month>11</Month><Day>20</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0191-2917</ISSN><JournalIssue CitedMedium="Print"><Volume>96</Volume><Issue>8</Issue><PubDate><Year>2012</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Plant disease</Title><ISOAbbreviation>Plant Dis</ISOAbbreviation></Journal><ArticleTitle>Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.</ArticleTitle><Pagination><MedlinePgn>1080-1103</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1094/PDIS-12-11-1036-FE</ELocationID><Abstract><AbstractText>With the increased attention given to the genus Phytophthora in the last decade in response to the ecological and economic impact of several invasive species (such as P. ramorum, P. kernoviae, and P. alni), there has been a significant increase in the number of described species. In part, this is due to the extensive surveys in historically underexplored ecosystems (e.g., forest and stream ecosystems) undertaken to determine the spread of invasive species and the involvement of Phytophthora species in forest decline worldwide (e.g., oak decline). The past decade has seen an approximate doubling in the number of described species within the genus Phytophthora, and the number will likely continue to increase as more surveys are completed and greater attention is devoted to clarifying phylogenetic relationships and delineating boundaries in species complexes. The development of molecular resources, the availability of credible sequence databases to simplify identification of new species, and the sequencing of several genomes have provided a solid framework to gain a better understanding of the biology, diversity, and taxonomic relationships within the genus. This information is much needed considering the impact invasive or exotic Phytophthora species have had on natural ecosystems and the regulatory issues associated with their management. While this work is improving our ability to identify species based on phylogenetic grouping, it has also revealed that the genus has a much greater diversity than previously appreciated.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Martin</LastName><ForeName>Frank N</ForeName><Initials>FN</Initials><AffiliationInfo><Affiliation>USDA, ARS, Crop Improvement and Protection Research Unit, Salinas, CA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Abad</LastName><ForeName>Z Gloria</ForeName><Initials>ZG</Initials><AffiliationInfo><Affiliation>USDA, APHIS, PPQ, Center for Plant Health Science and Technology (CPHST), Beltsville Laboratory, MD.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Balci</LastName><ForeName>Yilmaz</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ivors</LastName><ForeName>Kelly</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, NC State University, Mountain Hort. Crops Research & Extension Center, Mills River, NC.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Dis</MedlineTA><NlmUniqueID>9882809</NlmUniqueID><ISSNLinking>0191-2917</ISSNLinking></MedlineJournalInfo></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>2</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2012</Year><Month>8</Month><Day>1</Day><Hour>0</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2012</Year><Month>8</Month><Day>1</Day><Hour>0</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30727075</ArticleId><ArticleId IdType="doi">10.1094/PDIS-12-11-1036-FE</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Californie</li><li>Caroline du Nord</li><li>Maryland</li></region></list><tree><country name="États-Unis"><region name="Californie"><name sortKey="Martin, Frank N" sort="Martin, Frank N" uniqKey="Martin F" first="Frank N" last="Martin">Frank N. Martin</name></region><name sortKey="Abad, Z Gloria" sort="Abad, Z Gloria" uniqKey="Abad Z" first="Z Gloria" last="Abad">Z Gloria Abad</name><name sortKey="Balci, Yilmaz" sort="Balci, Yilmaz" uniqKey="Balci Y" first="Yilmaz" last="Balci">Yilmaz Balci</name><name sortKey="Ivors, Kelly" sort="Ivors, Kelly" uniqKey="Ivors K" first="Kelly" last="Ivors">Kelly Ivors</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhytophthoraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001511 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001511 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PhytophthoraV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:30727075
|texte= Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:30727075" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PhytophthoraV1
| This area was generated with Dilib version V0.6.38. |  |